Home     Genomes     Blat     Tables     PCR     FAQ     Help  
  Sulfolobus spindle-shaped virus 4 (Sulfolobus spindle-shaped virus 4) Genome Browser Gateway
 
The UCSC Genome Browser was created by the Genome Bioinformatics Group of UC Santa Cruz.
Software Copyright (c) The Regents of the University of California. All rights reserved.
clade genome assembly position or search term image width  
Click here to reset the browser user interface settings to their defaults.

  About the Sulfolobus spindle-shaped virus 4 11/20/2007 (sulfSpin_VIRUS_4) assembly (sequences)
 

Species Information

The Sulfolobus spindle-shaped virus 4 genome is 0.02 Million bp long and contains approximately 34 predicted genes.

Taxonomy: Viruses; dsDNA viruses, no RNA stage; Fuselloviridae; Fusellovirus; unclassified Fusellovirus.

The most recent genome sequence draft was released 11/20/2007 but there is no associated genome publication to date.

Isolation: Isolation publication not available

Sequenced related species/strains: Sulfolobus virus 1, Sulfolobus virus 2, Sulfolobus virus Kamchatka 1, Sulfolobus virus Ragged Hills

Browse Specific Gene/Feature Sets

Sample position queries

A genome position can be specified by chromosomal coordinate range, COG ID, or keywords from the GenBank or TIGR description of a gene. The available chromosome/plasmid names are:

Browser Chrom/Plasmid NameLength (bp)GC Content (%)Gene CountNCBI RefSeq Accession
chr1513538.4734NC_009986

The following list shows examples of valid position queries for this genome: 

Request:Genome Browser Response:
chrDisplays the entire sequence "chr" in the browser window
chr:1-10000    Displays first ten thousand bases of the sequence "chr"
transporter    Lists all genes with "transporter" in the name or description
SSSV4_ORF280Display genome at position of gene SSSV4_ORF280

Credits

The Archaeal Genome Browsers at UCSC were developed by members of the Lowe Lab (Kevin Schneider, Katherine Pollard, Andy Pohl, Todd Lowe) and Robert Baertsch, with significant support from the UCSC Human Genome Browser group. The Archaeal Browsers are run by a slightly modified version of the UCSC Human Genome Browser system. All queries, bug reports, content corrections, suggested improvements, and new track data submissions should be sent to Todd Lowe (lowe @soe.ucsc.edu).

If you use the browser in your published research, please cite our publication in the Nucleic Acids Research Database Issue. Citations and positive feedback will help us obtain funding to continue development of this community resource.