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The Pseudomonas aeruginosa PAO1 genome is 6.26 Million bp long and contains approximately 5651
predicted genes.
The sequence was released 09/13/2000 by the PathoGenesis Corporation, and was described
in Nature :959-64 (2000) Stover CK, Pham XQ, Erwin AL, Mizoguchi SD, Warrener P, et al. "Complete genome sequence of Pseudomonas aeruginosa PA01, an opportunistic pathogen.
"
Abstract: Pseudomonas aeruginosa is a ubiquitous environmental bacterium that is one of the top three causes of opportunistic human infections. A major factor in its prominence as a pathogen is its intrinsic resistance to antibiotics and disinfectants. Here we report the complete sequence of P. aeruginosa strain PAO1. At 6.3 million base pairs, this is the largest bacterial genome sequenced, and the sequence provides insights into the basis of the versatility and intrinsic drug resistance of P.... [Click above reference link for full abstract]
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
Sequenced related species/strains: Acinetobacter baumannii ATCC 17978, Acinetobacter sp. ADP1, Pseudomonas aeruginosa UCBPP-PA14, Pseudomonas entomophila L48, Pseudomonas fluorescens Pf-5, Pseudomonas fluorescens PfO-1, Pseudomonas mendocina ymp, Pseudomonas putida F1, Pseudomonas putida KT2440, Pseudomonas stutzeri A1501, Pseudomonas syringae pv. phaseolicola 1448A, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. tomato str. DC3000, Psychrobacter sp. PRwf-1, Psychrobacter arcticus 273-4, Psychrobacter cryohalolentis K5
Sample position queries
A genome position can be specified by chromosomal coordinate range, COG
ID, or keywords from the GenBank or TIGR description of a gene.
The available chromosome/plasmid names are:
| Browser Chrom/Plasmid Name | Length (bp) | GC Content (%) | Gene Count | NCBI RefSeq Accession |
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| chr | 6264404 | 66.56 | 5651 | NC_002516 |
The following list shows examples of valid position queries for this
genome:
| Request: | Genome Browser Response: |
|---|
| chr | Displays the entire sequence "chr" in the browser window |
| chr:1-10000 | Displays first ten thousand bases of the sequence "chr" |
| transporter | Lists all genes with "transporter" in the name or description |
| PA0010 | Display genome at position of gene PA0010 |
Credits
The Archaeal Genome Browsers at UCSC were developed by members of the
Lowe Lab (Kevin Schneider,
Katherine Pollard, Andy Pohl, Todd Lowe) and Robert Baertsch, with significant support from
the UCSC Human Genome
Browser group.
The Archaeal Browsers are run by a slightly modified
version of the UCSC Human Genome
Browser system. All queries, bug reports, content corrections, suggested improvements,
and new track data submissions should be sent to Todd Lowe (lowe
@soe.ucsc.edu).
If you use the browser in your published research, please cite our
publication in the Nucleic Acids Research Database
Issue. Citations and positive feedback will help us obtain funding
to continue development of this community resource.
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